Bioinformatics & data analysis
From raw reads to biological insight
Automated, version-controlled pipelines move your project from raw sequence data to publication-ready results — industry-standard workflows tuned to your platform, with transparent QC at every step and PhD-level scientists guiding interpretation.
Analysis packages
Choose your level of analysis
Every sequencing service can pair with one of three analysis packages — from raw data to fully interpreted results.
Standard Packages
Automated, version-controlled secondary analysis for routine workflows.
- Data QC reports
- Read alignments (BAM)
- Standard analysis toolset for the specific workflow
Best for teams running their own downstream analysis.
Request this serviceAdvanced Packages
Everything in Standard, with deeper interpretation layered on.
- All standard deliverables
- Advanced reporting through extended toolsets
- Workflow-specific deeper analysis
Best for teams that want results interpreted for them.
Request this serviceSpecialized Packages
Everything in Advanced, built around your study.
- Custom analysis matched to project goals
- Hourly analysis options
- Dedicated full-time bioinformatics support
Best for novel, custom or multi-omic study designs.
Request this serviceAnalysis pipelines
Pipelines for every data type
RNA-Seq Analysis
Alignment, quantification, differential expression, pathway analysis and gene ontology.
Single-Cell Analysis
QC, clustering, cell-type annotation, trajectory inference and differential abundance.
Spatial Analysis
Spatial alignment, region annotation and tumor-microenvironment deconvolution.
Variant Analysis
Germline and somatic calling, annotation, CNV and structural-variant detection.
Immune & Repertoire
TCR/BCR clonotype analysis, repertoire diversity and longitudinal clonal tracking.
Multi-Omic Integration
Harmonize modalities and run joint analyses into one integrated biological story.
What you receive
Transparent, publication-ready deliverables
Step 1
Raw data (FASTQ)
Raw sequence files for every sample, organized and documented.
Step 2
Alignments (BAM)
Optimized read alignments to the appropriate reference species.
Step 3
QC & analysis reports
Multi-stage QC plus expression matrices, VCF variants, clonotypes and more.
Step 4
Publication-ready results
Custom analysis and support carried through to publication.
Beyond the FASTQ
Visualizations we deliver
Standard, version-controlled outputs with every project — plus dedicated analyst support to query results and iterate on figures without waiting.
Deliverables include
Alignment stats
PCA plots
Correlation plots
Heatmaps
Gene networks
Alignment stats
PCA plots
Correlation plots
Heatmaps
Gene networks
Scoring heat maps
Delta distribution
Clonotype expansion
Cell-type annotation
UMAP / t-SNE cluster plots
Scoring heat maps
Delta distribution
Clonotype expansion
Cell-type annotation
UMAP / t-SNE cluster plots
Figures & files delivered with every project — hover to pause
FAQs
Plan your project
Resources & insights
Go deeper
Explore related analysis services
Analysis matched to your platform
Need help turning data into insight?
Tell us about your data and goals — a PhD scientist replies within one business day with the right analysis package and a tailored plan and quote.
- Automated, version-controlled pipelines
- Transparent QC at every step
- PhD-level scientists guiding interpretation
- Publication-ready results & reporting
Ready to launch your study?
Share your samples and goals — a doctoral-level scientist responds within one business day with a study plan and competing blind quotes.
- Expert-guided study design & service matching
- Competitive quotes, adaptable turnaround times
- End-to-end bioinformatics & reporting
- Run by accredited facilities across the nationwide network
Administered by Syntax of Life Private Limited
Request a quote